{"id":121,"date":"2012-08-22T21:35:01","date_gmt":"2012-08-22T13:35:01","guid":{"rendered":"http:\/\/www.hzaumycology.com\/chenlianfu_blog\/?p=121"},"modified":"2012-08-22T22:43:15","modified_gmt":"2012-08-22T14:43:15","slug":"blast%e4%b8%admakeblastdb%e5%8f%82%e6%95%b0%e8%af%a6%e8%a7%a3","status":"publish","type":"post","link":"http:\/\/www.chenlianfu.com\/?p=121","title":{"rendered":"BLAST+\u4e2dmakeblastdb\u53c2\u6570\u8be6\u89e3"},"content":{"rendered":"<p>\u4e00\u822c\u6211\u4eec\u662f\u6709\u4e00\u4e2afasta\u6587\u4ef6\u7528\u6765\u683c\u5f0f\u5316\u6570\u636e\u5e93\uff0c\u4ee5\u524d\u7684\u547d\u4ee4\u662fformatdb\uff0c\u73b0\u5728\u662fmakeblastdb<\/p>\n<p>\u4e00\u822c\u7528\u5230\u7684\u683c\u5f0f\u5982\u4e0b\uff1a<\/p>\n<pre>makeblastdb -in input_file -dbtype molecule_type -title database_title -parse_seqids -out database_name -logfile File_Name<\/pre>\n<p>\u6ce8\u610f\uff1aBLAST+2.2.24\u4e2d\u8fd9\u4e2a\u53c2\u6570\u4e0d\u8981\u52a0 -parse_seqids\uff0c\u4e0d\u7136\u6210\u6b7b\u5faa\u73af<\/p>\n<pre>-in \u540e\u63a5\u8f93\u5165\u6587\u4ef6\uff0c\u4f60\u8981\u683c\u5f0f\u5316\u7684fasta\u5e8f\u5217\r\n-dbtype \u540e\u63a5\u5e8f\u5217\u7c7b\u578b\uff0cnucl\u4e3a\u6838\u9178\uff0cprot\u4e3a\u86cb\u767d\r\n-title \u7ed9\u6570\u636e\u5e93\u8d77\u4e2a\u540d\uff0c\u597d\u770b~~(\u4e0d\u80fd\u7528\u5728\u540e\u9762\u641c\u7d22\u65f6-db\u7684\u53c2\u6570)\r\n-parse_seqids \u63a8\u8350\u52a0\u4e0a\uff0c\u73b0\u5728\u6709\u5565\u539f\u56e0\u8fd8\u6ca1\u641e\u6e05\u695a\r\n-out \u540e\u63a5\u6570\u636e\u5e93\u540d\uff0c\u81ea\u5df1\u8d77\u4e00\u4e2a\u6709\u610f\u4e49\u7684\u540d\u5b57\uff0c\u4ee5\u540eblast+\u641c\u7d22\u65f6\u8981\u7528\u5230\u7684-db\u7684\u53c2\u6570\r\n-logfile \u65e5\u5fd7\u6587\u4ef6\uff0c\u5982\u679c\u6ca1\u6709\u9ed8\u8ba4\u8f93\u51fa\u5230\u5c4f\u5e55<\/pre>\n","protected":false},"excerpt":{"rendered":"<p>\u4e00\u822c\u6211\u4eec\u662f\u6709\u4e00\u4e2afasta\u6587\u4ef6\u7528\u6765\u683c\u5f0f\u5316\u6570\u636e\u5e93\uff0c\u4ee5\u524d\u7684\u547d\u4ee4\u662fformatdb\uff0c\u73b0 &hellip; <a href=\"http:\/\/www.chenlianfu.com\/?p=121\">\u7ee7\u7eed\u9605\u8bfb <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":[],"categories":[3],"tags":[8],"_links":{"self":[{"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/posts\/121"}],"collection":[{"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=121"}],"version-history":[{"count":4,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/posts\/121\/revisions"}],"predecessor-version":[{"id":165,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/posts\/121\/revisions\/165"}],"wp:attachment":[{"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=121"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=121"},{"taxonomy":"post_tag","embeddable":true,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=121"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}