{"id":2317,"date":"2015-08-25T16:51:17","date_gmt":"2015-08-25T08:51:17","guid":{"rendered":"http:\/\/www.chenlianfu.com\/?p=2317"},"modified":"2015-08-25T16:51:17","modified_gmt":"2015-08-25T08:51:17","slug":"jbrowse-%e7%9a%84%e4%b8%8b%e8%bd%bd%e5%92%8c%e5%ae%89%e8%a3%85","status":"publish","type":"post","link":"http:\/\/www.chenlianfu.com\/?p=2317","title":{"rendered":"JBrowse \u7684\u4e0b\u8f7d\u548c\u5b89\u88c5"},"content":{"rendered":"<h1>1. JBrowse \u7b80\u4ecb<\/h1>\n<h1>2. JBrowse \u4e0b\u8f7d\u548c\u5b89\u88c5<\/h1>\n<p>\u4e0b\u8f7d JBrowse \u5b89\u88c5\u5305\uff0c\u5e76\u5b89\u88c5\uff1a<\/p>\n<pre>\r\n$ wget http:\/\/jbrowse.org\/releases\/JBrowse-1.11.5.zip\r\n$ wget http:\/\/jbrowse.org\/releases\/JBrowse-1.11.5-dev.zip\r\n$ unzip JBrowse-1.11.5.zip -d \/opt\/biosoft\r\n$ unzip JBrowse-1.11.5-dev.zip -d \/opt\/biosoft\r\n$ cd \/opt\/biosoft\/JBrowse-1.11.5\r\n$ sudo .\/setup.sh\r\n$ echo 'PATH=$PATH:\/opt\/biosoft\/JBrowse-1.11.5' >> ~\/.bashrc\r\n<\/pre>\n<p>\u914d\u7f6e apache\uff1a<\/p>\n<pre>\r\n# echo 'Alias \/JBrowse \"\/opt\/biosoft\/JBrowse-1.11.5\/\"\r\n&lt;Directory \"\/opt\/biosoft\/JBrowse-1.11.5\/\"&gt;\r\n    Options MultiViews ExecCGI Indexes FollowSymlinks\r\n    AllowOverride None\r\n    Order allow,deny\r\n    Allow from all\r\n&lt;\/Directory&gt;' &gt; \/etc\/httpd\/conf.d\/JBrowse.conf\r\n# \/etc\/init.d\/httpd restart\r\n<\/pre>\n<p>\u6253\u5f00\u8f6f\u4ef6\u81ea\u5e26\u7684\u793a\u4f8b <a href=\"http:\/\/www.chenlianfu.com\/JBrowse\/index.html?data=sample_data\/json\/volvox\" target=\"_blank\">Volvox JBrowse<\/a>\u3002<\/p>\n<h1>3. JBrowse \u914d\u7f6e<\/h1>\n","protected":false},"excerpt":{"rendered":"<p>1. JBrowse \u7b80\u4ecb 2. JBrowse \u4e0b\u8f7d\u548c\u5b89\u88c5 \u4e0b\u8f7d JBrows &hellip; <a href=\"http:\/\/www.chenlianfu.com\/?p=2317\">\u7ee7\u7eed\u9605\u8bfb <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":[],"categories":[3],"tags":[72],"_links":{"self":[{"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/posts\/2317"}],"collection":[{"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=2317"}],"version-history":[{"count":1,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/posts\/2317\/revisions"}],"predecessor-version":[{"id":2318,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=\/wp\/v2\/posts\/2317\/revisions\/2318"}],"wp:attachment":[{"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=2317"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=2317"},{"taxonomy":"post_tag","embeddable":true,"href":"http:\/\/www.chenlianfu.com\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=2317"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}